PIPages
Labs

William DePas

University of Pittsburgh, PA·Microbiology & Immunology

Nontuberculous mycobacteria (NTM) are relatives of the tuberculosis bacterium. They are becoming dangerous, antibiotic-resistant lung pathogens, especially in people with cystic fibrosis (CF), a genetic disease that fills the lungs with thick mucus.

Fields

Microbiology & Immunology

Medicine & Clinical Research

Topics

nontuberculous mycobacteria

Mycobacterium

cystic fibrosis

Grants
1 known grant, through Feb 2028

What they work on

  1. Determine how the chemical environment of cystic fibrosis sputum regulates biofilm formation by nontuberculous mycobacteria and how biofilms affect antibiotic tolerance, using a new aggregation assay and MiPACT-HCR imaging.
  2. Determine how dormancy caused by lack of oxygen affects NTM antibiotic tolerance and biofilm formation, using the 3D Agar Block Biofilm Assay that models the CF lung environment.
  3. Measure NTM biofilm structure and growth rate directly in samples from people with CF, using MiPACT-HCR tissue clearing and bacterial labeling.

More about the research

Bacteria can form biofilms, slow-growing communities stuck together, and can enter dormancy, a resting state. Both states can sharply reduce how well antibiotics and immune defenses work. Yet little is known about whether NTM actually use these states during human infection.

Why it matters

People with cystic fibrosis who get NTM lung infections face long, often failing antibiotic treatments. Knowing whether NTM grow as slow biofilms or go dormant during infection could guide doctors' choice and dosing of antibiotics. It could also reveal molecular targets for new treatments that break up biofilms or wake dormant bacteria.

Known grants

From NIH and NSF research grants. Labs often have other funding we can't see.

The Impact of the Cystic Fibrosis infection environment on biofilm development of nontuberculous mycobacteria

NIH · Mar 2023 – Feb 2028

Closest labs

Daniel J Wozniak

Ohio State University, OH·Microbiology & Immunology

Define how Psl, a secreted sugar polymer of Pseudomonas aeruginosa, suppresses Staphylococcus aureus growth and interacts with S. aureus protein A (SpA), using several complementary strategies.

Emily Henkle

Oregon Health & Science University, OR·Medicine & Clinical Research

Enroll three cohorts of patients with NTM lung disease, at diagnosis (NTM-WATCH), at treatment start (NTM-TREAT) and at treatment end (NTM-TRACK), and collect patient-reported outcomes and clinical data for up to 24 months.

Stephen Dolan

Clemson University, SC·Microbiology & Immunology·Early-career

Define the molecular basis of communication between Aspergillus fumigatus and Pseudomonas aeruginosa, mediated by the toxins gliotoxin and hydrogen cyanide, by co-culturing them in synthetic cystic fibrosis sputum.

The school

University of Pittsburgh: 83 labs on PI Pages, $1.5B a year on research, 403 research doctorates a year.

More about University of Pittsburgh

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